polygonPlotsFromAggNodeBenthosFiles: Produce polygons time series plots for Benthos indicators and...

In frabas/displaceplot: A suite of R routines to treat DISPLACE simulation output files

Description

This function generates polygon plots in absolute or relative to the baseline scenario. Input data files are searched in the folder hierarchy. Only the median is displayed if in relative terms because the uncertainty range cannot be handled in this case

Usage

polygonPlotsFromAggNodeBenthosFiles(general, is_relative = TRUE,
  the_baseline = "svana_baseline")

Arguments

fname	First name
lname	Last name

Examples

## Not run: 
general <- setGeneralOverallVariable (pathToRawInputs =file.path("C:", "Users", "fbas", 
                                                "Documents", "GitHub", paste0("DISPLACE_input_gis_", 
                                                 "DanishFleet")),
                                      pathToDisplaceInputs = file.path("C:", "Users", "fbas", 
                                                "Documents", "GitHub", paste0("DISPLACE_input_", "DanishFleet")),
                                      pathToOutputs =file.path("C:","DISPLACE_outputs"),
                                      caseStudy="DanishFleet",
                                      iGraph=41,
                                      iYear="2015",
                                      iCountry="DEN",
                                      nbPops=39,
                                      nbSzgroup=14,
                                      theScenarios= c("svana_baseline",
                                                      "svana_sub1mx20",
                                                      "svana_sub4mx20",
                                                      "svana_sub4mx5ns20bt",
                                                      "svana_sub4mx20ns5bt",
                                                      "svana_sub4mx5ns5bt" ),
                                      nbSimus=20,
                                      useSQLite=FALSE    
                                      )


getAggNodeBenthosLayerFiles (general,  a_tstep="34321")
 #=> produce files in output folders....


  polygonPlotsFromAggNodeBenthosFiles (general, 
                                               is_relative= TRUE,
                                               the_baseline= "svana_baseline")


 
## End(Not run)

frabas/displaceplot documentation built on May 3, 2019, 4:06 p.m.