llik: log-likelihood of a phylogenetic tree
In franciscorichter/dmea02: Diversification and Macro-Evolution Analysis

it calculates the log-likelihood of a phylogenetic tree under the diversity-dependance model.

1	llik(pars, tree)

`pars`	Parameters corresponding to the diversity-dependance model
`tree`	phylogenetic tree described as the three vectors wt,E and n.

log-likelihood value

F. Richter M.

1 2	s= sim.tree() llik(c(0.8,0.1,40),s$tree)

franciscorichter/dmea02 documentation built on March 21, 2020, 3:46 a.m.

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