Keep all meta data when overlapping gene ranges or converting to dataframe.
character with file path. If given, a data.frame is generated from the returned GRanges object and written to this destination. Omitted if NULL.
numeric with mumber of bases to be added to the start coordinate when converting a GRanges object to a dataframe. E.g. necessary for switching between 0-based and 1-based genome coordinate systems.
By default, meta data is lost when GRanges are merged or overlapped.
subsetByOverlaps.keepAllMeta returns overlap of two GRanges objects with
merged meta data from both. Meta data stored in
is collapsed to a single column.
granges2df generates a data.frame from an GRanges containing the meta data.
Meta data stored in
CompressedCharacterList is collapsed to a single column.
subsetByOverlaps.keepAllMeta returnes GRanges object containing
overlap and meta data from input ranges.
granges2df returns a data.frame with genomic coordinates and meta data
from input object.
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