convert-data-types-and-values: Convert data types in 'data.frame(dataType,isList)' to...

In frankkramer-lab/RCX: R package implementing the Cytoscape Exchange (CX) format

Convert data types in data.frame(dataType,isList) to character of NDEx data types

Description

Convert data types in data.frame(dataType,isList) to character of NDEx data types

Usage

.convertDataTypes(df, cols = c(dataType = "dataType", isList = "isList"))

.convertValues(df, cols = c(value = "value", isList = "isList"))

Arguments

df	data.frame with dataType and isList: data.frame(dataType,isList)
cols	named character; column names of dataType and isList in df

Value

character; NDEx data types (e.g. "string" or "list_of_integer")

Note

Internal function only for convenience

Examples

df = data.frame(dataType=c("string","boolean","double","integer","long",
                           "string","boolean","double","integer","long"),
                isList=c(FALSE,FALSE,FALSE,FALSE,FALSE,
                         TRUE,TRUE,TRUE,TRUE,TRUE))
df$value = list("string",TRUE,3.14,314,314,
                c("str","ing"),c(TRUE,FALSE),c(3.14,1.0),c(314,666),c(314,666))
RCX:::.convertDataTypes(df)
RCX:::.convertValues(df)

frankkramer-lab/RCX documentation built on Feb. 4, 2023, 5:12 p.m.