aggregate_tibble_by_datatables: highly optimized aggregation of the peptides data table....

In ftwkoopmans/msdap: Mass Spectrometry Downstream Analysis Pipeline

highly optimized aggregation of the peptides data table. rewrite aggregate_tibble_by_datatables; more speed, support charge/mz columns (if present), take RT from most abundant peptide with prio for detected. the latter matters when merging data for plain sequences where one precursor has an MS/MS identification and the other is MBR

Description

highly optimized aggregation of the peptides data table. rewrite aggregate_tibble_by_datatables; more speed, support charge/mz columns (if present), take RT from most abundant peptide with prio for detected. the latter matters when merging data for plain sequences where one precursor has an MS/MS identification and the other is MBR

Usage

aggregate_tibble_by_datatables(peptides, prop_peptide = "sequence_plain")

Arguments

peptides	todo
prop_peptide	must be either 'sequence_plain', 'sequence_modified' or 'peptide_id' (the former 2 are the common use-case)

ftwkoopmans/msdap documentation built on March 5, 2025, 12:15 a.m.