de_msqrob_customformula: MSqRob test function for internal use
In ftwkoopmans/msdap: Mass Spectrometry Downstream Analysis Pipeline

View source: R/stats_differential_abundance.R

de_msqrob_customformula

R Documentation

MSqRob test function for internal use

Description

MSqRob test function for internal use

Usage

de_msqrob_customformula(
  peptides,
  proteins,
  samples,
  main_variable = "condition",
  ordered_variables = c("batch", "condition"),
  min_values = NULL
)

Arguments

`peptides`	TODO
`proteins`	TODO
`samples`	TODO
`main_variable`	TODO
`ordered_variables`	TODO
`min_values`	minimum number of data points in each condition. Alternatively, use `options(msdap.dea.minvalue = 5)`