The package implements the A-clustering algorithm to detect regions of co-regulated CoG sites, and a pipeline focused on the analysis of methylation data, in which they are assumed to be outcomes. The analysis starts with a clustering step, in which adjacent probes are clustered based on correlations, and then exposure effect is estimated using GEEs. There is a function to output the results and write tables to a latex file.
Package details |
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Author | Tamar Sofer |
Maintainer | Tamar Sofer <tsofer@hsph.harvard.edu> |
License | GPL2 |
Version | 2.0.1 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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