importGTF: Import GTF file into R
In fursham-h/factR: Functional Annotation of Custom Transcriptomes
importGTF R Documentation
Import GTF file into R
Description
This function loads GTF files into R and converts it into
a wrapper to rtracklayer::import() function to conveniently
import GTF file into R as a GenomicRanges object.
Usage
importGTF(con)
Arguments
con
Path to GTF file
Value
Imported GenomicRanges object in GTF format
Author(s)
Fursham Hamid
Examples
gtf <- system.file("extdata", "sc_merged_sample.gtf.gz", package = "factR")
importGTF(gtf)
fursham-h/factR documentation built on Aug. 20, 2023, 1:58 p.m.
R Package Documentation
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| importGTF | R Documentation |
Import GTF file into R
Description
This function loads GTF files into R and converts it into
a wrapper to rtracklayer::import() function to conveniently import GTF file into R as a GenomicRanges object.
Usage
importGTF(con)
Arguments
con |
Path to GTF file |
Value
Imported GenomicRanges object in GTF format
Author(s)
Fursham Hamid
Examples
gtf <- system.file("extdata", "sc_merged_sample.gtf.gz", package = "factR")
importGTF(gtf)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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