factR contain tools to process and interact with custom-assembled transcriptomes (GTF). At its core, factR constructs CDS information on custom transcripts and subsequently predicts its functional output. In addition, factR has tools capable of plotting transcripts, correcting chromosome and gene information and shortlisting new transcripts.
|Bioconductor views||AlternativeSplicing FunctionalPrediction GenePrediction|
|Package repository||View on GitHub|
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