fursham-h/factR: Functional Annotation of Custom Transcriptomes

factR contain tools to process and interact with custom-assembled transcriptomes (GTF). At its core, factR constructs CDS information on custom transcripts and subsequently predicts its functional output. In addition, factR has tools capable of plotting transcripts, correcting chromosome and gene information and shortlisting new transcripts.

Getting started

Package details

Bioconductor views AlternativeSplicing FunctionalPrediction GenePrediction
Maintainer
Licensefile LICENSE
Version0.99.4
URL https://fursham-h.github.io/factR/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("fursham-h/factR")
fursham-h/factR documentation built on June 11, 2021, 6:42 a.m.