transform_rasters: Transform environmental rasters in ecophysiological rasters.

In gabrielhoc/MapinguariLegacy: Tools for process-based biogeographical analysis

Description

transform_rasters Get model predictions for a raster stack

Usage

transform_rasters(raster_stack, FUN_qlist, separator = "_",
  alert = NULL)

Arguments

raster_stack	RasterStack. Stack with environmental layers.
FUN_qlist	list. A list of unevaluated expressions, as created by function qlist.
separator	character. Character that separates variable names, years and scenarios.
alert	integer. Plays a sound alert when function is done running. See documentation of package beepr for description of sound options.

Value

Returns a RasterStack with layers for the predictions required.

Examples

FulanusEcoRasters_present <-
  get_rasters(
    raster_source = "/Users/gabriel/Documents/Mapinguari/global_grids_10_minutes",
    ext = FulanusDistribution,
    margin = 5,
    non_fixed_var = c('prec', 'tmin', 'tmax'),
    fixed_var = 'alt',
    years = c("present"),
    reorder = TRUE)

transform_rasters(raster_stack = FulanusEcoRasters_present$present,
  FUN = qlist(total_1sem = sum(tmax[[1:6]]),
    mean_1sem = mean(tmax[[1:6]]),
    sd_1sem = sd(tmax[[1:6]]),
    total_2sem = sum(tmax[[7:12]]),
    mean_2sem = mean(tmax[[7:12]]),
    sd_2sem = sd(tmax[[7:12]])),
  separator = '_',
  alert = NULL)

gabrielhoc/MapinguariLegacy documentation built on May 8, 2019, 9:54 p.m.