autoplot.decorana: ggplot-based plot for objects of class '"decorana"'

In gavinsimpson/ggvegan: 'ggplot2' Plots for the 'vegan' Package

ggplot-based plot for objects of class "decorana"

Description

Produces a multi-layer ggplot object representing the output of objects produced by decorana.

Usage

## S3 method for class 'decorana'
autoplot(
  object,
  axes = c(1, 2),
  geom = c("point", "text"),
  layers = c("species", "sites"),
  legend.position = "right",
  title = NULL,
  subtitle = NULL,
  caption = NULL,
  ylab,
  xlab,
  ...
)

Arguments

object	an object of class "decorana", the result of a call to decorana.
axes	numeric; which axes to plot, given as a vector of length 2.
geom	character; which geoms to use for the layers. Can be a vector of length equal to length(display), in which case the ith element of type refers to the ith element of display.
layers	character; which scores to plot as layers
legend.position	character or two-element numeric vector; where to position the legend. See theme for details. Use "none" to not draw the legend.
title	character; subtitle for the plot
subtitle	character; subtitle for the plot
caption	character; caption for the plot
ylab	character; label for the y-axis
xlab	character; label for the x-axis
...	Additional arguments passed to fortify.decorana.

Details

TODO

Value

Returns a ggplot object.

Author(s)

Gavin L. Simpson

Examples

data(dune)

sol <- decorana(dune)
autoplot(sol)
autoplot(sol, display = "species", geom = "text")

gavinsimpson/ggvegan documentation built on July 28, 2023, 9:24 a.m.