Description Usage Arguments Value Examples
Main entry point to unpack Exac vcf data. Unpacking is needed because multiallelics are hard to deal with, so each alt allele is split into its separate row. Fields which are lists are converted to scalars. FIXME! very slow, need to see if we can optimize
1 | unpackExacData(exacData, transcriptID)
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exacData |
Raw Exac data frame as returned from genomicRTools R package |
Data frame with each row being a separate alt allele.
1 | exacData <- unpackExacData(exacData,'ENST0000323456')
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