Files in gecko515/HEMDAG
Hierarchical Ensemble Methods for Directed Acyclic Graphs
.travis.yml
DESCRIPTION
LICENSE.md
MD5
NAMESPACE
NEWS.md
R/GPAV.R
R/HTD.R
R/IO.fun.R
R/TPR-DAG.R
R/graph.utility.R
R/heuristic.methods.R
R/norm.fun.R
R/perf.meas.R
R/pkg.attach.R
R/pkg.import.R
README.md
data/graph.rda
data/labels.rda
data/scores.rda
data/test.index.rda
data/wadj.rda
docs/Makefile
docs/_build/doctrees/authors.doctree
docs/_build/doctrees/citing.doctree
docs/_build/doctrees/contributing.doctree
docs/_build/doctrees/environment.pickle
docs/_build/doctrees/faq.doctree
docs/_build/doctrees/history.doctree
docs/_build/doctrees/index.doctree
docs/_build/doctrees/install.doctree
docs/_build/doctrees/license.doctree
docs/_build/doctrees/quickstart.doctree
docs/_build/doctrees/tutorial.doctree
docs/_build/doctrees/usage.doctree
docs/_build/html/.buildinfo
docs/_build/html/.nojekyll
docs/_build/html/_images/graph.png
docs/_build/html/_sources/authors.rst.txt
docs/_build/html/_sources/citing.rst.txt
docs/_build/html/_sources/contributing.rst.txt
docs/_build/html/_sources/faq.rst.txt
docs/_build/html/_sources/history.rst.txt
docs/_build/html/_sources/index.rst.txt
docs/_build/html/_sources/install.rst.txt
docs/_build/html/_sources/license.rst.txt
docs/_build/html/_sources/quickstart.rst.txt
docs/_build/html/_sources/tutorial.rst.txt
docs/_build/html/_sources/usage.rst.txt
docs/_build/html/_static/ajax-loader.gif
docs/_build/html/_static/basic.css
docs/_build/html/_static/comment-bright.png
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docs/_build/html/_static/css/badge_only.css
docs/_build/html/_static/css/theme.css
docs/_build/html/_static/doctools.js
docs/_build/html/_static/documentation_options.js
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docs/_build/html/_static/down.png
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docs/_build/html/_static/fonts/Inconsolata-Bold.ttf
docs/_build/html/_static/fonts/Inconsolata-Regular.ttf
docs/_build/html/_static/fonts/Inconsolata.ttf
docs/_build/html/_static/fonts/Lato-Bold.ttf
docs/_build/html/_static/fonts/Lato-Regular.ttf
docs/_build/html/_static/fonts/Lato/lato-bold.eot
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docs/_build/html/_static/fonts/Lato/lato-bolditalic.eot
docs/_build/html/_static/fonts/Lato/lato-bolditalic.ttf
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docs/_build/html/_static/fonts/Lato/lato-italic.ttf
docs/_build/html/_static/fonts/Lato/lato-italic.woff
docs/_build/html/_static/fonts/Lato/lato-italic.woff2
docs/_build/html/_static/fonts/Lato/lato-regular.eot
docs/_build/html/_static/fonts/Lato/lato-regular.ttf
docs/_build/html/_static/fonts/Lato/lato-regular.woff
docs/_build/html/_static/fonts/Lato/lato-regular.woff2
docs/_build/html/_static/fonts/RobotoSlab-Bold.ttf
docs/_build/html/_static/fonts/RobotoSlab-Regular.ttf
docs/_build/html/_static/fonts/RobotoSlab/roboto-slab-v7-bold.eot
docs/_build/html/_static/fonts/RobotoSlab/roboto-slab-v7-bold.ttf
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docs/_build/html/_static/fonts/RobotoSlab/roboto-slab-v7-bold.woff2
docs/_build/html/_static/fonts/RobotoSlab/roboto-slab-v7-regular.eot
docs/_build/html/_static/fonts/RobotoSlab/roboto-slab-v7-regular.ttf
docs/_build/html/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff
docs/_build/html/_static/fonts/RobotoSlab/roboto-slab-v7-regular.woff2
docs/_build/html/_static/fonts/fontawesome-webfont.eot
docs/_build/html/_static/fonts/fontawesome-webfont.svg
docs/_build/html/_static/fonts/fontawesome-webfont.ttf
docs/_build/html/_static/fonts/fontawesome-webfont.woff
docs/_build/html/_static/fonts/fontawesome-webfont.woff2
docs/_build/html/_static/jquery-3.2.1.js
docs/_build/html/_static/jquery.js
docs/_build/html/_static/js/modernizr.min.js
docs/_build/html/_static/js/theme.js
docs/_build/html/_static/minus.png
docs/_build/html/_static/plus.png
docs/_build/html/_static/pygments.css
docs/_build/html/_static/searchtools.js
docs/_build/html/_static/underscore-1.3.1.js
docs/_build/html/_static/underscore.js
docs/_build/html/_static/up-pressed.png
docs/_build/html/_static/up.png
docs/_build/html/_static/websupport.js
docs/_build/html/authors.html
docs/_build/html/citing.html
docs/_build/html/contributing.html
docs/_build/html/faq.html
docs/_build/html/genindex.html
docs/_build/html/history.html
docs/_build/html/index.html
docs/_build/html/install.html
docs/_build/html/license.html
docs/_build/html/objects.inv
docs/_build/html/quickstart.html
docs/_build/html/search.html
docs/_build/html/searchindex.js
docs/_build/html/tutorial.html
docs/_build/html/usage.html
docs/authors.rst
docs/citing.rst
docs/conf.py
docs/contributing.rst
docs/data/7227_DROME_GO_MF_ANN_STRING_v10.5_20DEC17.rda
docs/data/7227_DROME_GO_MF_DAG_STRING_v10.5_20DEC17.rda
docs/data/README.md
docs/data/Scores.7227.DROME.GO.MF.pearson.100.feature.LogitBoost.5fcv.rda
docs/environment.yml
docs/faq.rst
docs/history.rst
docs/index.rst
docs/install.rst
docs/license.rst
docs/make.bat
docs/pictures/graph.png
docs/quickstart.rst
docs/requirements.txt
docs/tutorial.rst
docs/usage.rst
inst/CITATION
inst/HEMDAG_2.5.9.pdf
inst/extdata/edges.txt.gz
inst/extdata/gene2pheno.txt.gz
inst/extdata/graph.edges.txt.gz
man/AUPRC.Rd
man/AUROC.Rd
man/Do.GPAV.Rd
man/Do.GPAV.holdout.Rd
man/Do.HTD.Rd
man/Do.HTD.holdout.Rd
man/Do.flat.scores.normalization.Rd
man/Do.full.annotation.matrix.Rd
man/Do.heuristic.methods.Rd
man/Do.heuristic.methods.holdout.Rd
man/FMM.Rd
man/GPAV.Rd
man/GPAV.over.examples.Rd
man/GPAV.parallel.Rd
man/HEMDAG-package.Rd
man/HTD-DAG.Rd
man/Heuristic-Methods.Rd
man/Multilabel.F.measure.Rd
man/PXR.Rd
man/TPR-DAG-cross-validation.Rd
man/TPR-DAG-holdout.Rd
man/TPR-DAG-variants.Rd
man/adj.upper.tri.Rd
man/ancestors.Rd
man/build.consistent.graph.Rd
man/check.DAG.integrity.Rd
man/check.annotation.matrix.integrity.Rd
man/children.Rd
man/compute.flipped.graph.Rd
man/constraints.matrix.Rd
man/create.stratified.fold.df.Rd
man/descendants.Rd
man/distances.from.leaves.Rd
man/do.edges.from.HPO.obo.Rd
man/do.subgraph.Rd
man/do.submatrix.Rd
man/do.unstratified.cv.data.Rd
man/example.datasets.Rd
man/find.best.f.Rd
man/find.leaves.Rd
man/full.annotation.matrix.Rd
man/graph.levels.Rd
man/hierarchical.checkers.Rd
man/lexicographical.topological.sort.Rd
man/normalize.max.Rd
man/parents.Rd
man/read.graph.Rd
man/read.undirected.graph.Rd
man/root.node.Rd
man/scores.normalization.Rd
man/specific.annotation.list.Rd
man/specific.annotation.matrix.Rd
man/stratified.cross.validation.Rd
man/transitive.closure.annotations.Rd
man/tupla.matrix.Rd
man/weighted.adjacency.matrix.Rd
man/write.graph.Rd
src/GPAV.cpp
src/GPAV.o
src/HEMDAG.so
src/Makevars
src/registerDynamicSymbol.c
src/registerDynamicSymbol.o
