API for genesofeve/projectR
Functions for the projection of weights from PCA, CoGAPS, NMF, correlation, and clustering
| Global functions | |
|---|---|
| .cluster2pattern | Source code |
| .cluster2pattern_hclust | Source code |
| .cluster2pattern_kmeans | Source code |
| .cluster2pattern_numeric | Source code |
| AP.RNAseq6l3c3t | Man page |
| CR.RNAseq6l3c3t | Man page |
| alluvialMat | Man page Source code |
| aucMat | Man page Source code |
| bonferroniCorrectedDifferences | Man page Source code |
| cluster2pattern | Man page |
| cluster2pattern,character-method | Man page |
| cluster2pattern,hclust-method | Man page |
| cluster2pattern,kmeans-method | Man page |
| cluster2pattern,numeric-method | Man page |
| cluster2pattern-class | Man page |
| clusterPlotR | Man page |
| clusterPlotR,ANY,hclust-method | Man page |
| clusterPlotR,ANY,kmeans-method | Man page |
| clusterPlotR.hclust | Source code |
| clusterPlotR.kmeans | Source code |
| compareBoots | Source code |
| correlateR | Man page Source code |
| correlateR-class | Man page |
| cr_microglial | Man page |
| geneMatchR | Man page Source code |
| getTSNE | Man page Source code |
| getUMAP | Man page Source code |
| glial_counts | Man page |
| initialize,cluster2pattern-method | Man page |
| initialize,correlateR-method | Man page |
| initialize,rotatoR-method | Man page |
| intersectoR | Man page |
| intersectoR,hclust,hclust-method | Man page |
| intersectoR,kmeans,kmeans-method | Man page |
| intersectoR.hclust | Source code |
| intersectoR.kmeans | Source code |
| map.ESepiGen4c1l | Man page |
| map.RNAseq6l3c3t | Man page |
| microglial_counts | Man page |
| multivariateAnalysisR | Man page Source code |
| multivariateAnalysisR_seurat_test | Man page |
| p.ESepiGen4c1l | Man page |
| p.RNAseq6l3c3t | Man page |
| pd.ESepiGen4c1l | Man page |
| pd.RNAseq6l3c3t | Man page |
| pdVolcano | Man page Source code |
| plotConfidenceIntervals | Man page Source code |
| plotVolcano | Man page Source code |
| projectR | Man page |
| projectR,dgCMatrix,matrix-method | Man page |
| projectR,matrix,LinearEmbeddingMatrix-method | Man page |
| projectR,matrix,cluster2pattern-method | Man page |
| projectR,matrix,correlateR-method | Man page |
| projectR,matrix,hclust-method | Man page |
| projectR,matrix,kmeans-method | Man page |
| projectR,matrix,matrix-method | Man page |
| projectR,matrix,prcomp-method | Man page |
| projectR,matrix,rotatoR-method | Man page |
| projectionDriveR | Man page Source code |
| retinal_patterns | Man page |
| rotatoR | Man page Source code |
| rotatoR-class | Man page |
