getTSNE: getTSNE
In genesofeve/projectR: Functions for the projection of weights from PCA, CoGAPS, NMF, correlation, and clustering
View source: R/helperFunctions.R
getTSNE R Documentation
getTSNE
Description
Function to provide tSNE of projection
Usage
getTSNE(projection, axis = 2, ...)
Arguments
projection
martrix, a projection generated from projectR
axis
integer, either 1 umap of projection or 2 for umap of transpose of projection
...
addtional arguments passed to tsne
Examples
projection <- projectR(data=p.ESepiGen4c1l$mRNA.Seq,loadings=AP.RNAseq6l3c3t$Amean,
dataNames = map.ESepiGen4c1l[["GeneSymbols"]], full = TRUE)
projectionTSNE <- getTSNE(projection)
genesofeve/projectR documentation built on April 18, 2024, 6:07 p.m.
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View source: R/helperFunctions.R
| getTSNE | R Documentation |
getTSNE
Description
Function to provide tSNE of projection
Usage
getTSNE(projection, axis = 2, ...)
Arguments
projection |
martrix, a projection generated from projectR |
axis |
integer, either 1 umap of projection or 2 for umap of transpose of projection |
... |
addtional arguments passed to tsne |
Examples
projection <- projectR(data=p.ESepiGen4c1l$mRNA.Seq,loadings=AP.RNAseq6l3c3t$Amean,
dataNames = map.ESepiGen4c1l[["GeneSymbols"]], full = TRUE)
projectionTSNE <- getTSNE(projection)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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