gx.importTable: Import a table from a text file
In genexplain/geneXplainR: An R interface for the geneXplain platform

gx.importTable

R Documentation

Import a table from a text file

Description

This function imports a table into an existing platform folder.

Usage

gx.importTable(tableFile, platformFolder, tableName = "imported_table",
  processQuotes = TRUE, delim = "Tab", headerRow = 1, dataRow = 2,
  commentString = "", columnForID = "", addSuffix = FALSE,
  tableType = "", species = "Unspecified")

Arguments

`tableFile`	path to file with the table
`platformFolder`	folder into which the table is imported
`tableName`	name for the table within the platform
`processQuotes`	true to process quotation marks
`delim`	column delimiter, one of the strings (Tab, Spaces, Commas, Pipes)
`headerRow`	row index of the table header
`dataRow`	row index of the first data row
`commentString`	string to recognize comment lines
`columnForID`	name of column with ids
`addSuffix`	true to add suffix to ensure unique ids
`tableType`	type of platform table, e.g. Genes: Ensembl
`species`	Latin name of species