head-methods: Return the First Part of an Object

In girke-lab/signatureSearch: Environment for Gene Expression Searching Combined with Functional Enrichment Analysis

Return the First Part of an Object

Description

Return the first part of the result table in the gessResult, and feaResult objects

Usage

## S4 method for signature 'gessResult'
head(x, n = 6L, ...)

## S4 method for signature 'feaResult'
head(x, n = 6L, ...)

Arguments

x	an object
n	a single integer. If positive or zero, size for the resulting object is the number of rows for a data frame. If negative, all but the n last number of rows of x.
...	arguments to be passed to or from other methods

Value

data.frame

Examples

gr <- gessResult(result=dplyr::tibble(pert=letters[seq_len(10)], 
                                      val=seq_len(10)), 
                 query=list(up=c("g1","g2"), down=c("g3","g4")),
                 gess_method="LINCS", refdb="path/to/lincs/db")
head(gr)
fr <- feaResult(result=dplyr::tibble(id=letters[seq_len(10)], 
                                    val=seq_len(10)),
                organism="human", ontology="MF", drugs=c("d1", "d2"), 
                targets=c("t1","t2"))
head(fr)

girke-lab/signatureSearch documentation built on Feb. 21, 2024, 8:32 a.m.