lincs_pert_info2: LINCS 2020 Perturbation Information
In girke-lab/signatureSearch: Environment for Gene Expression Searching Combined with Functional Enrichment Analysis
lincs_pert_info2 R Documentation
LINCS 2020 Perturbation Information
Description
It is a tibble containing annotation information of compounds in LINCS 2020
beta database including perturbation id, perturbation name, canonical smiles,
Inchi key, compound aliases, target and MOA. The PubChem CID and many other
annotations from ChEMBL database were obtained from 2017 LINCS pert info by
by left joining with pert_iname.
Usage
lincs_pert_info2
Format
A tibble object with 34419 rows and 48 columns.
Examples
# Load object
data(lincs_pert_info2)
lincs_pert_info2
girke-lab/signatureSearch documentation built on Feb. 21, 2024, 8:32 a.m.
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| lincs_pert_info2 | R Documentation |
LINCS 2020 Perturbation Information
Description
It is a tibble containing annotation information of compounds in LINCS 2020 beta database including perturbation id, perturbation name, canonical smiles, Inchi key, compound aliases, target and MOA. The PubChem CID and many other annotations from ChEMBL database were obtained from 2017 LINCS pert info by by left joining with pert_iname.
Usage
lincs_pert_info2
Format
A tibble object with 34419 rows and 48 columns.
Examples
# Load object
data(lincs_pert_info2)
lincs_pert_info2
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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