GC.content: Content in GC from DNA Sequences
In gjuggler/ape: Analyses of Phylogenetics and Evolution
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Description
This function computes the percentage of G+C in a sample of DNA sequences.
Usage
1
GC.content(x)
Arguments
x
a vector, a matrix, a data frame, or a list which contains
the DNA sequences.
Details
The percentage of G+C is computed over all sequences in the
sample. All missing or unknown sites are discarded from the
computations. The present function actually uses the function
base.freq.
Value
A single numeric value is returned.
Author(s)
Emmanuel Paradis
See Also
gjuggler/ape documentation built on May 17, 2019, 6:03 a.m.
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Description Usage Arguments Details Value Author(s) See Also
Description
This function computes the percentage of G+C in a sample of DNA sequences.
Usage
1 | GC.content(x)
|
Arguments
x |
a vector, a matrix, a data frame, or a list which contains the DNA sequences. |
Details
The percentage of G+C is computed over all sequences in the
sample. All missing or unknown sites are discarded from the
computations. The present function actually uses the function
base.freq.
Value
A single numeric value is returned.
Author(s)
Emmanuel Paradis
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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