del.gaps: Delete Alignment Gaps in DNA Sequences
In gjuggler/ape: Analyses of Phylogenetics and Evolution
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Description
This function removes the insertion gaps ("-") in a sample of
DNA sequences.
Usage
1
del.gaps(x)
Arguments
x
a matrix, a list, or a vector containing the DNA sequences.
Details
The sequences can be either in "DNAbin" or in character format,
but the returned object is always of class "DNAbin". If
x is a vector, then a vector is returned; if it is a list or a
matrix, then a list is returned.
Value
A vector (if there is only one input sequence) or a list of class
"DNAbin".
Author(s)
Emmanuel Paradis
See Also
base.freq, GC.content,
theta.s, nuc.div, seg.sites
gjuggler/ape documentation built on May 17, 2019, 6:03 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s) See Also
Description
This function removes the insertion gaps ("-") in a sample of
DNA sequences.
Usage
1 | del.gaps(x)
|
Arguments
x |
a matrix, a list, or a vector containing the DNA sequences. |
Details
The sequences can be either in "DNAbin" or in character format,
but the returned object is always of class "DNAbin". If
x is a vector, then a vector is returned; if it is a list or a
matrix, then a list is returned.
Value
A vector (if there is only one input sequence) or a list of class
"DNAbin".
Author(s)
Emmanuel Paradis
See Also
base.freq, GC.content,
theta.s, nuc.div, seg.sites
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.