Description Usage Arguments Value Author(s) See Also Examples
This function tests whether a phylogenetic tree is binary, i.e. whether every node (including the root node) has exactly two descendant nodes. In this case the number of edges in the tree equals 2 n - 2 where n is the number of taxa (tips) in the tree.
1 | is.binary.tree(phy)
|
phy |
phylogenetic tree (i.e. an object of class |
is.binary.tree
returns TRUE
if tree
is a fully binary phylogenetic tree, otherwise it returns FALSE
.
Korbinian Strimmer (http://www.stat.uni-muenchen.de/~strimmer/)
read.tree
, is.ultrametric
, multi2di
1 2 3 4 5 6 7 8 | data("hivtree.newick") # example tree in NH format
tree.hiv <- read.tree(text = hivtree.newick) # load tree
is.binary.tree(tree.hiv)
plot(tree.hiv)
unlink("hivtree.phy") # delete the file "hivtree.phy"
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.