Description Usage Arguments Value Author(s) References See Also Examples
Interactive function for specifying the dimensions of the spot
matrix and the grid matrix. These parameters depend on the printing
layout of the array, and are used for the within print-tip group
normalization implemented in stat.ma
and the spatial
representation of spot statistics in plot.spatial
.
1 |
None.
list containing the following components
nspot.r |
the number of rows of spots per grid; |
nspot.c |
the number of columns of spots per grid; |
ngrid.r |
the number of rows of grids per image; |
ngrid.c |
the number of columns of grids per image. |
Yee Hwa Yang, yeehwa@stat.berkeley.edu
Sandrine Dudoit, sandrine@stat.berkeley.edu
Spot manual.
plot.mva
, plot.spatial
,
stat.ma
, list
.
1 2 3 4 5 6 7 8 9 | data(MouseArray)
# mouse.setup <- init.grid()
## Here is what you should see:
# Enter number of rows of grids per image (ngrid.r): 4
# Enter number of columns of grids per image (ngrid.c): 4
# Enter number of rows of spots per grid (nspot.r): 19
# Enter number of columns of spots per grid (nspot.c): 21
# Initialization complete
|
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