extractCoefficients: extractCoefficients Extract coefficients from model fitting...

In gofflab/glmpd: Identification of context-specific drivers of a pattern projection via GLM fitting.

Description

extractCoefficients Extract coefficients from model fitting object. Each object of list requires a column exactly named "gene_id".

Usage

extractCoefficients(glm_models, genes)

Arguments

glm_models	Named List (over patterns) of objects returned from "full_result" of fit_models_cds. Organizes each pattern by gene.
genes	gene ids that exactly match the count matrix which was provided to fitGLMpd()

Value

Returns a mutileveled list of fitted model coefficients. Hierarchy of organization: pattern (list), gene (list), coefficients (data.frame)

gofflab/glmpd documentation built on April 11, 2021, 6:38 a.m.