plotPatternUsageByCondition: #Function to plot a continuous variable (eg pattern usage)...

In gofflab/glmpd: Identification of context-specific drivers of a pattern projection via GLM fitting.

Description

#Function to plot a continuous variable (eg pattern usage) over a categorical variable such as time. Provide feature (continuous) and bin_by (categorical, discrete) as strings that matches a column in pData.

Usage

plotPatternUsageByCondition(feature, cds, conditions, bin_by = NULL)

Arguments

feature	A names or vector of names of continuous values in pData to plot the values
cds	A monocle3 cell_data_set object
bin_by	A categorical value in pData to group cells by

Value

Returns a boxplot (or list of plots) of cells projected pattern weights, for groups of interest

gofflab/glmpd documentation built on April 11, 2021, 6:38 a.m.