clustalo: Clustal Omega Client

In gotoolchest/toolchest-client-r: R Client for Toolchest

Clustal Omega Client

Description

Runs Clustal Omega via Toolchest.

Usage

clustalo(
  tool_args = "",
  inputs,
  output_path = NULL,
  output_primary_name = NULL,
  ...
)

Arguments

tool_args	Additional arguments to be passed to Clustal Omega.
inputs	Path (client-side) to a FASTA file that will be passed in as input.
output_path	(optional) Path to directory where the output file(s) will be downloaded.
output_primary_name	(optional) Base name of output file.
is_async	(optional) Whether to run a job asynchronously. Defaults to false.

Value

Reference to an object with output location data.

gotoolchest/toolchest-client-r documentation built on July 14, 2022, 7 a.m.