grady/kdetrees: Nonparametric method for identifying discordant phylogenetic trees

A non-parametric method for identifying potential outlying observations in a collection of phylogenetic trees based on the methods of Owen and Provan (2011). Such discordant trees may indicate problems with sequence annotation or tree reconstruction, or they may represent interesting biological phenomena, such as horizontal gene transfers.

Getting started

Package details

AuthorGrady Weyenberg and Ruriko Yoshida
MaintainerGrady Weyenberg <[email protected]>
LicenseGPL-2
Version2.0.1
URL http://github.com/grady/kdetrees
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("grady/kdetrees")
grady/kdetrees documentation built on Jan. 28, 2018, 10:33 a.m.