as.matrix.multiPhylo: dissimilarity map tree vectorization
In grady/kdetrees: Nonparametric method for identifying discordant phylogenetic trees
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Dissimilarity maps convert trees to vectors using tip-to-tip path
lengths. Branch length information may be optionally discarded
(the default), resulting in vectors based solely on tree
topology.
Usage
1
2
Arguments
x
an ape::multiPhylo object.
...
additional options for ape::cophenetic.phylo
Value
a row matrix of tree vectors
Author(s)
Grady Weyenberg
Examples
1
as.matrix(apicomplexa[1:5])
grady/kdetrees documentation built on May 17, 2019, 8:01 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Dissimilarity maps convert trees to vectors using tip-to-tip path lengths. Branch length information may be optionally discarded (the default), resulting in vectors based solely on tree topology.
Usage
1 2 |
Arguments
x |
an ape::multiPhylo object. |
... |
additional options for |
Value
a row matrix of tree vectors
Author(s)
Grady Weyenberg
Examples
1 | as.matrix(apicomplexa[1:5])
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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