ladder.plot.with.transparent.lines: ladder.plot.with.transparent.lines

In graeberlab-ucla/glab.library: Data Analysis Functions

ladder.plot.with.transparent.lines

Description

ladder.plot.with.transparent.lines

Usage

ladder.plot.with.transparent.lines(z, title, metric, ladder_color, cex = 1.5)

Arguments

z	dataframe with list of genes (or similar) and metrics that can be used to rank the genes, and indication of the geneset membership based on the gene color (column with colname="color"; any color = member, "transparent" = non-member)
title	title for the plot, typically the name/description of the gene set used for the enrichment analysis
metric	parameter indicating the metric (column name) in dataframe z to be used to rank genes
cex	character enhancement factor - scales the foint size

Value

RVAL

Examples

provided below the functions, at the end of the file

graeberlab-ucla/glab.library documentation built on Oct. 28, 2024, 10:48 a.m.