GMS_v4-class: Class GMS_v4
In griffithlab/GenVisR: Genomic Visualizations in R
GMS_v4-class R Documentation
Class GMS_v4
Description
An S4 class to represent data in gms annotation version 4,
inherits from the GMS_Virtual class.
Usage
GMS_v4(gmsData)
Arguments
gmsData
data.table object containing a gms annotation file conforming
to the version 4 specifications.
Slots
positiondata.table object containing column names "chromosome_name",
"start", "stop".
mutationdata.table object containing column names "reference",
"variant", "trv_type".
sampledata.table object containing columns names "sample".
metadata.table object containing meta data.
griffithlab/GenVisR documentation built on May 14, 2024, 12:40 a.m.
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| GMS_v4-class | R Documentation |
Class GMS_v4
Description
An S4 class to represent data in gms annotation version 4, inherits from the GMS_Virtual class.
Usage
GMS_v4(gmsData)
Arguments
gmsData |
data.table object containing a gms annotation file conforming to the version 4 specifications. |
Slots
positiondata.table object containing column names "chromosome_name", "start", "stop".
mutationdata.table object containing column names "reference", "variant", "trv_type".
sampledata.table object containing columns names "sample".
metadata.table object containing meta data.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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