Files in grybnicky/Spacer2PAM
An R Package for Predicting CRISPR System Protospacer Adjacent Motifs from CRISPR Array Spacer Sequences

.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/FASTA2AlignmentDF.R R/alignmentCSV2DF.R R/df2fasta.R R/fasta2df.R R/join2PAM.R R/joinSpacerDFandAlignmentDF.R R/setCRISPRInfo.R R/submit2Phaster.R README.md
Spacer2PAM.Rproj
inst/.DS_Store
inst/extdata/.DS_Store
inst/extdata/B halodurans C-125-Alignment-HitTable.csv
inst/extdata/Bacillus halodurans C-125 System 1 Protospacers Upstream 1.pdf
inst/extdata/Bacillus halodurans C-125 System 1 spacers.fasta
inst/extdata/Bacillus halodurans C-125 collectionFrame.csv
inst/extdata/Bacillus halodurans C-125 spacers with repeat.csv
man/FASTA2AlignmentDF.Rd man/alignmentCSV2DF.Rd man/df2fasta.Rd man/fasta2df.Rd man/join2PAM.Rd man/joinSpacerDFandAlignmentDF.Rd man/setCRISPRInfo.Rd man/submit2Phaster.Rd
vignettes/.gitignore
vignettes/Spacer2PAM-Vignette.Rmd
grybnicky/Spacer2PAM documentation built on Jan. 30, 2023, 2:55 a.m.