df2fasta: Convert a Spacer Dataframe to a FASTA file
In grybnicky/Spacer2PAM: An R Package for Predicting CRISPR System Protospacer Adjacent Motifs from CRISPR Array Spacer Sequences
df2fasta R Documentation
Convert a Spacer Dataframe to a FASTA file
Description
This function allows you to convert a dataframe containing the spacer data to a FASTA file with annotation nomenclature compatible with the rest of this package. The FASTA is written to the current file location with file name "_spacers.fasta" where the blank is filled with the systemName as defined by the setCRISPRInfo function.
Usage
df2fasta(spacerDataFrame)
Arguments
spacerDataFrame
The appropriately formatted data frame containing the CRISPR array spacers and associated data.
Examples
df2fasta()
grybnicky/Spacer2PAM documentation built on Jan. 30, 2023, 2:55 a.m.
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| df2fasta | R Documentation |
Convert a Spacer Dataframe to a FASTA file
Description
This function allows you to convert a dataframe containing the spacer data to a FASTA file with annotation nomenclature compatible with the rest of this package. The FASTA is written to the current file location with file name "_spacers.fasta" where the blank is filled with the systemName as defined by the setCRISPRInfo function.
Usage
df2fasta(spacerDataFrame)
Arguments
spacerDataFrame |
The appropriately formatted data frame containing the CRISPR array spacers and associated data. |
Examples
df2fasta()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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