get_testdata: Retrieve testing data from ngsrep for a gene

Description Usage Arguments Value Examples

Description

Retrieve testing data from ngsrep for a gene

Usage

1

Arguments

gene

A HLA gene.

nextype_basis_id

A neXtype Basis ID.

Value

A table with the fields:

lims_donor_id
nextype_run_id
orig_nmdp1
orig_nmdp2
exon
eag_num
main_eag
total_reads
best_reads

Examples

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## Not run: 
testdata <- get_testdata("DPB1", "1267")

## End(Not run)

gschofl/HLAsim documentation built on May 17, 2019, 8:51 a.m.