sample_dna_concentration: Extract a random sample of DNA concentrations.

In gschofl/HLAsim: Simulate allelic dropouts in HLA data

Description

THIS FUNCTION REQURIES ACCESS TO INTERNAL DATABASES AT DKMS LSL.

Use the prepackaged dataset (concentration) instead.

Usage

sample_dna_concentration(x, n = 10000, ncores = 4)

Arguments

x	A <HLA> object.
n	Number of samples.
ncores	How many cores to we use for querying the database.

Value

A data.table with the fields:

• "lims_donor_id": LIMS_DONOR_ID

• "ymd": A timestamp.

• "conc": The DNA concentration in ng/µl.

Examples

## Not run: 
## Generate a random distribution of DNA concentrations
data("dpb1")
conc <- sample_dna_concentration(dpb1, n = 12000, ncores = 12)

## End(Not run)

gschofl/HLAsim documentation built on May 17, 2019, 8:51 a.m.