plot.err.time: Plot timeline data for multiple groups
In gtimmerhaus/aquaR: Functions for aquaculture related topics

Description Usage Arguments Examples

View source: R/plot.err.time.R

Calculates the mean value for each group and time point. Adds error bars, showing +/- standard error (default) or standard deviation. Data is plotted with dots and lines.

## S3 method for class 'err.time'
plot(data, time, groups, col = "black",
  err.bars = "sterr", dodge = 0.02, cex = 2, xlab = "",
  ylab = "means", length = 0.02, lwd = 1, main = "", xaxt = T,
  las.x = 1, las.y = 2, legend.pos = "topleft", legend = TRUE,
  ylim = NULL, stats = FALSE)

`data`	a numeric vector containing the data to plot.
`time`	a vector containing the time point information for data.
`groups`	vector containing the group information for data.
`col`	vector defining the color for each group. Must have the same length as number of groups.
`dodge`	adds a dodge to the x-axis position of the groups.
`cex`	defines the size of the dots.
`length`	defines the length of the arrow heads of the error bars
`xaxt`	if TRUE (default) an x-axis is added to the plot.
`legend.pos`	defines the legend position. Must be "topleft", "topright", "bottomleft" or "bottomright". If legend != TRUE, no legend will be drawn.
`stats`	adds markers for significant differences (ANOVA, for the respective timepoint) to the bottom of the plot.
`err`	error bars show standard error ("sterr") or standard deviation ("sd").

1	plot.err.time(data = c(1,2,4,5,4,3,2,3,3,4,6,5,4,3,2,3,4,5,2,3), time = c(rep(c(rep(1,5),rep(2,5)),2)), groups = c(rep("a",10),rep("b",10)), col=c("blue","red"))