deseq2_table: DESeq2 table
In gtsitsiridis/metatranscriptome: Visualization tool for the metatranscriptome project
Description
Usage
Arguments
Value
Description
Performs differential expression analysis using DESeq2. If cond1 and cond2 are both NULL then all conditions are taken.
Usage
1
deseq2_table(phylo, attribute, conds, formula = NULL, parallel = F)
Arguments
phylo
phyloseq object
attribute
Column name of the sample table, obtained from sam_data.
conds
conditions
Value
DESeq2 table returned from results.
gtsitsiridis/metatranscriptome documentation built on May 17, 2019, 1:33 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Performs differential expression analysis using DESeq2. If cond1 and cond2 are both NULL then all conditions are taken.
Usage
1 | deseq2_table(phylo, attribute, conds, formula = NULL, parallel = F)
|
Arguments
phylo |
phyloseq object |
attribute |
Column name of the sample table, obtained from sam_data. |
conds |
conditions |
Value
DESeq2 table returned from results.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.