plot_top_species: Top relative abundance Plot the relative abundance of the...
In gtsitsiridis/metatranscriptome: Visualization tool for the metatranscriptome project
Usage
1
2
plot_top_species(phylo, top_n = 10L, attribute, level = "Species",
test = F)
Arguments
phylo
phyloseq object
top_n
integer indicating how many species to show
attribute
Column name of the sample table, obtained from sam_data.
Value
A bar plot grouped by attribute.
gtsitsiridis/metatranscriptome documentation built on May 17, 2019, 1:33 p.m.
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Usage
1 2 | plot_top_species(phylo, top_n = 10L, attribute, level = "Species",
test = F)
|
Arguments
phylo |
phyloseq object |
top_n |
integer indicating how many species to show |
attribute |
Column name of the sample table, obtained from sam_data. |
Value
A bar plot grouped by attribute.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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