initiateBackgroundModel: Create a new 'dagBackground-class' object for 'testDAU'.
In haibol2016/dagLogo: dagLogo: a bioconductor package for visualizeing conserved amino acid sequence pattern in groups based on probability theory
Description
Usage
Arguments
Value
Author(s)
View source: R/buildBackgroundModel.R
Description
Create a new dagBackground-class object for testDAU.
Usage
1
initiateBackgroundModel(background, numSubsamples = 1L, testType)
Arguments
background
A list, each element of which is a vector of aligned peptide
sequences of the same length.
numSubsamples
An integer, the number of random samplings to get
background sequence set.
testType
An character, the type of statistic testing : "ztest" or "fisher".
Value
An object of dagBackground-class.
Author(s)
Haibo Liu
haibol2016/dagLogo documentation built on June 28, 2020, 1:31 a.m.
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Description Usage Arguments Value Author(s)
View source: R/buildBackgroundModel.R
Description
Create a new dagBackground-class object for testDAU.
Usage
1 | initiateBackgroundModel(background, numSubsamples = 1L, testType)
|
Arguments
background |
A list, each element of which is a vector of aligned peptide sequences of the same length. |
numSubsamples |
An integer, the number of random samplings to get background sequence set. |
testType |
An character, the type of statistic testing : "ztest" or "fisher". |
Value
An object of dagBackground-class.
Author(s)
Haibo Liu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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