Description Usage Format Variables
This data frame containts information about SNVs and InDels that are reported as part of CLL project. There is 7860 rows and each row represents annotated SNV/InDel reported in one of 337 patients with CLL. These are filtered SNVs and InDels for segmental duplication, exonix or splicing, intersection of used kits region, etc. They follow MAF like format with additional columns like ploidy, CCF_CNV, etc. Data frame has 23 columns.
1 |
data frame
Chromosome
Start_Position
Reference_Allele
Tumor_Seq_Allele2
Hugo_Symbol
Tumor_Sample_Barcode
VAF
Function.Refseq
ExonicFunction.Refseq
...
ploidy
CCF_CNV
Damege_score
gender
Variant_Classification
Variant_Type
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