Files in hansenlab/bnbc
Bandwise normalization and batch correction of Hi-C data
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/RcppExports.R
R/bnbc.R
R/contactGroup.R
R/contactGroup_utils.R
README.md
data/cgEx.rda
inst/CITATION
inst/NEWS.Rd
inst/cooler/GM19238_Rep1.cool
inst/cooler/GM19238_Rep1.mcool
inst/cooler/GM19238_Rep2.cool
inst/cooler/GM19238_Rep2.mcool
inst/unitTests/test_data.R
inst/unitTests/test_matrix.R
man/ContactGroup-class.Rd
man/apply_functions.Rd
man/band.Rd
man/bnbc-package.Rd
man/bnbc.Rd
man/cgEx.Rd
man/cooler_methods.Rd
man/getBandIdx.Rd
man/getBandMatrix.Rd
man/groupZeros.Rd
man/smoothing.Rd
src/RcppExports.cpp
src/update_bands.cpp
tests/runTests.R
vignettes/bnbc.Rmd
vignettes/bnbc.bib
