graph: Functions depending on igraph

In heavywatal/rtumopp: R interface to tumopp, a tumor growth simulator in C++

Functions depending on igraph

Description

Functions depending on igraph

Usage

make_igraph(population)

subtree(graph, nodes = integer(0L))

internal_nodes(graph, nodes, sensitivity)

Arguments

population	tbl
graph	igraph
nodes	integer cell IDs
sensitivity	minimum allele frequency

Details

make_igraph converts raw population tbl into graph.

subtree extracts subgraph among terminal nodes.

internal_nodes selects major common ancestors above threshold.

heavywatal/rtumopp documentation built on March 30, 2024, 11:08 a.m.