Man pages for helen-zhu/DPDE4PM
A Method for Peak Merging Across Biological Replicates
| dot-bed6tobed12 | Creates a BED12 file from a BED6 file using unique columns of... |
| dot-generate.peaks.from.gmm | generate.peaks.from.gmm is a function that takes the output... |
| dot-get.gene.anno | A function that returns a list of characteristics of the gene... |
| dot-merge.p | A function used to merge p-values using Fisher's method |
| dot-plot.merged.peaks | Makes a plot of the merged peaks and the fitted curve |
| dot-retrieve.peaks.as.granges | Converts the PEAKS BED12 format to a usable GRanges BED6... |
| DPDE4PM | DPDE4PM merged RNA-seq peaks called on different samples |
| plot.gene.peaks | Creates a pile up of bed files using the Sushi R package |
| read.gtf | read.gtf is a function that imports a gtf file and creates an... |
