dot-generate.peaks.from.gmm: generate.peaks.from.gmm is a function that takes the output...
In helen-zhu/DPDE4PM: A Method for Peak Merging Across Biological Replicates
Description
Usage
Arguments
Value
Description
generate.peaks.from.gmm is a function that takes the output of a GMM and generates peaks
Usage
1
.generate.peaks.from.gmm(dp_data, PARAMETERS, GENEINFO)
Arguments
dp_data
Results from fitting a Dirichlet Process GMM model
PARAMETERS
A PARAMETERS list with the parameters indicated in the DPDE4PM function
GENEINFO
A list of gene attributes generated by the get.gene.anno function
Value
- merged.peaks.filtered.rna
A merged peaks GenomicRanges object in RNA coordinates
- merged.peaks.filtered.genome
A merged peaks GenomicRanges object in genomic coordinates
helen-zhu/DPDE4PM documentation built on Feb. 17, 2021, 9:46 a.m.
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Description Usage Arguments Value
Description
generate.peaks.from.gmm is a function that takes the output of a GMM and generates peaks
Usage
1 | .generate.peaks.from.gmm(dp_data, PARAMETERS, GENEINFO)
|
Arguments
dp_data |
Results from fitting a Dirichlet Process GMM model |
PARAMETERS |
A PARAMETERS list with the parameters indicated in the DPDE4PM function |
GENEINFO |
A list of gene attributes generated by the get.gene.anno function |
Value
- merged.peaks.filtered.rna
A merged peaks GenomicRanges object in RNA coordinates
- merged.peaks.filtered.genome
A merged peaks GenomicRanges object in genomic coordinates
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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