dot-plot.merged.peaks: Makes a plot of the merged peaks and the fitted curve

In helen-zhu/DPDE4PM: A Method for Peak Merging Across Biological Replicates

Description

Makes a plot of the merged peaks and the fitted curve

Usage

.plot.merged.peaks(
  plot.startvec,
  plot.fit.frame,
  plot.bin.counts,
  plot.merged.peaks,
  plot.dp.data,
  PARAMETERS
)

Arguments

plot.startvec	A data frame of the points surveyed
plot.fit.frame	A data frame with the fitted Dirichlet process model on the points in the startvec
plot.bin.counts	A data frame of the coverage at a base pair resolution
plot.merged.peaks	A GRanges object containing the RNA coordinates of the merged peaks in BED6 format
plot.dp.data	A data frame of individual normal distributions fitted
PARAMETERS	A PARAMETERS list with the parameters indicated in the DPDE4PM function

helen-zhu/DPDE4PM documentation built on Feb. 17, 2021, 9:46 a.m.