Files in hheiling/glmmPen
High Dimensional Penalized Generalized Linear Mixed Models (pGLMM)
DESCRIPTION
NAMESPACE
R/E_step.R
R/E_step_final.R
R/E_step_final_FA.R
R/M_step.R
R/M_step_FA.R
R/RcppExports.R
R/SetClassDefn.R
R/basal_dataset.R
R/checks.R
R/control_options.R
R/coxph_utility.R
R/estimate_r.R
R/family_export.R
R/fit_dat.R
R/fit_dat_FA.R
R/formula_data_edits.R
R/glmmPen.R
R/glmmPen_FA.R
R/logLik_Pajor.R
R/logLik_Pajor_FA.R
R/methods.R
R/phmmPen.R
R/prescreen.R
R/prescreen_FA.R
R/sample_mc_functions.R
R/select_tune.R
R/select_tune_FA.R
R/sim_generation.R
R/sim_generation_FA.R
R/sim_generation_coxph.R
R/stanmodels.R
R/var_start_init.R
README.md
configure
configure.win
data/basal.RData
inst/glmmPen_1.5.4.4.pdf
inst/include/stan_meta_header.hpp
inst/lambda_check.R
inst/stan/binomial_logit_model.stan
inst/stan/gaussian_identity_model.stan
inst/stan/include/license.stan
inst/stan/poisson_log_model.stan
inst/update.R
man/LambdaSeq.Rd
man/adaptControl.Rd
man/basal.Rd
man/glmm.Rd
man/glmmPen.Rd
man/glmmPen_FA.Rd
man/glmm_FA.Rd
man/lambdaControl.Rd
man/optimControl.Rd
man/pglmmObj-class.Rd
man/phmm.Rd
man/phmmPen.Rd
man/phmmPen_FA.Rd
man/phmm_FA.Rd
man/plot_mcmc.Rd
man/rControl.Rd
man/sim.data.Rd
man/survivalControl.Rd
man/survival_data.Rd
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/coord_descent.cpp
src/grp_CD_XZ_FA_step.cpp
src/grp_CD_XZ_step.cpp
src/maxprod.cpp
src/penalties.cpp
src/pglm_fit.cpp
src/sample_mc_inner_gibbs.cpp
src/sample_mc_random_walk.cpp
src/stanExports_binomial_logit_model.cc
src/stanExports_binomial_logit_model.h
src/stanExports_gaussian_identity_model.cc
src/stanExports_gaussian_identity_model.h
src/stanExports_poisson_log_model.cc
src/stanExports_poisson_log_model.h
src/utility_CD.h
src/utility_FA.cpp
src/utility_glm.cpp
src/utility_glm.h
src/utility_grpCD.cpp
tests/testthat.R
tests/testthat/test-args-input.R
tests/testthat/test-data-input.R
