getStatesFromFasta: Get cell states from a fasta file

Description Usage Arguments

View source: R/inference.R

Description

Get cell states from a fasta file

Usage

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getStatesFromFasta(
  model = NULL,
  fasta.path = "example_files/fasta/a.fasta",
  maxlen = 80,
  batch.size = 100,
  verbose = F
)

Arguments

model

keras model

fasta.path

path to fasta file

maxlen

time steps to unroll for

batch.size

how many subsequences are predicted in parallel

verbose

print output


hiddengenome/deepG documentation built on April 16, 2020, 1:38 a.m.