reAlign: Local re-align reads
In hubentu/VarReviewer: Variant Reviewer
Description
To align reads to reference and alternative sequences based on
given indels/variants.
Usage
1
Arguments
var
A GRanges object with REF and ALT in metadata columns.
bam
a character vector of BAM files.
genome
The path of the reference genome file, or a BSgenome
reference object.
...
More options for verIndel.
hubentu/VarReviewer documentation built on June 7, 2019, 12:48 a.m.
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Description
To align reads to reference and alternative sequences based on given indels/variants.
Usage
1 |
Arguments
var |
A GRanges object with REF and ALT in metadata columns. |
bam |
a character vector of BAM files. |
genome |
The path of the reference genome file, or a BSgenome reference object. |
... |
More options for verIndel. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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