Files in hw538/cfDNAPro
cfDNAPro extracts and Visualises biological features from whole genome sequencing data of cell-free DNA

.Rbuildignore
.gitignore
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md R/calMetrics.R R/callCNV.R R/callLength.R R/callMode.R R/callMotif.R R/callPeakDistance.R R/callSize.R R/callValleyDistance.R R/downsampleBam.R R/examplePath.R R/internalFunctions.R R/plotAllToOne.R R/plotCNV.R R/plotLength.R R/plotMetrics.R R/plotMode.R R/plotModeSummary.R R/plotMotif.R R/plotPeakDistance.R R/plotSingleGroup.R R/plotValleyDistance.R R/readBam.R R/readGALP.R R/read_bam_insert_metrics.R R/summarizeBam.R R/themes.R R/userLevelMinorFunctions.R README.md
inst/extdata/groups_picard/cohort_1/sample0.txt
inst/extdata/groups_picard/cohort_1/sample1.txt
inst/extdata/groups_picard/cohort_1/sample2.txt
inst/extdata/groups_picard/cohort_1/sample4.txt
inst/extdata/groups_picard/cohort_1/sample5.txt
inst/extdata/groups_picard/cohort_2/sample6.txt
inst/extdata/groups_picard/cohort_2/sample7.txt
inst/extdata/groups_picard/cohort_2/sample8.txt
inst/extdata/groups_picard/cohort_3/sample10.txt
inst/extdata/groups_picard/cohort_3/sample11.txt
inst/extdata/groups_picard/cohort_3/sample12.txt
inst/extdata/groups_picard/cohort_3/sample13.txt
inst/extdata/groups_picard/cohort_3/sample14.txt
inst/extdata/groups_picard/cohort_3/sample9.txt
inst/extdata/groups_picard/cohort_4/sample15.txt
inst/extdata/groups_picard/cohort_4/sample16.txt
inst/extdata/groups_picard/cohort_4/sample17.txt
inst/extdata/groups_picard/cohort_4/sample18.txt
inst/extdata/step6/example/sample19.txt
inst/script/description_of_extdata.md man/callCNV.Rd man/callLength.Rd man/callMetrics.Rd man/callMode.Rd man/callMotif.Rd man/callPeakDistance.Rd man/callSize.Rd man/callValleyDistance.Rd man/downsampleBam.Rd man/examplePath.Rd man/plotAllToOne.Rd man/plotCNV.Rd man/plotLength.Rd man/plotMetrics.Rd man/plotMode.Rd man/plotModeSummary.Rd man/plotMotif.Rd man/plotPeakDistance.Rd man/plotSingleGroup.Rd man/plotValleyDistance.Rd man/readBam.Rd man/readGALP.Rd man/read_bam_insert_metrics.Rd man/summarizeBam.Rd tests/testthat.R tests/testthat/test_call_functions.R tests/testthat/test_plot_functions.R vignettes/cfDNAPro.Rmd
vignettes/logo.png
hw538/cfDNAPro documentation built on Aug. 13, 2024, 2:58 p.m.