Xtree: Evaluate species branch matrix (sensu Petchey&Gaston) from a...
In ibartomeus/fundiv: tools to calculate several functional trait diversity indexes
Description
Usage
Arguments
Value
Description
17/1/03. Written by Jens Schumacher. Please acknowledge as appropriate.
tested for results of hclust and agnes
hclust - hierarchical clustering
agnes - agglomerative clustering
used components:
merge - history of cluster merging
height - actual heights at merging
order - permutation to achieve nice output (needed only for agnes)
Usage
1
Xtree(h)
Arguments
h
a dendrogram generated by hclust()
Value
h2.prime contains the length of all the tiny branches
H1 each row represents one species, each column represents one branch
1 indicates that a branch is part of the pathway from species to top of the dendrogram
0 otherwise
ibartomeus/fundiv documentation built on May 18, 2019, 1:29 a.m.
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Description Usage Arguments Value
Description
17/1/03. Written by Jens Schumacher. Please acknowledge as appropriate. tested for results of hclust and agnes hclust - hierarchical clustering agnes - agglomerative clustering used components: merge - history of cluster merging height - actual heights at merging order - permutation to achieve nice output (needed only for agnes)
Usage
1 | Xtree(h)
|
Arguments
h |
a dendrogram generated by hclust() |
Value
h2.prime contains the length of all the tiny branches
H1 each row represents one species, each column represents one branch 1 indicates that a branch is part of the pathway from species to top of the dendrogram 0 otherwise
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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