Description Usage Arguments Value Examples
Calculate taxonomic trait beta diversity among all pairwise communities using Carvalho et al. 2012 decomposition and creates a dist object.
1 | beta_dist(W)
|
W |
matrix containing the abundances of the species per site (or presence-absence, i.e. 0 or 1). Rows are sites and species are columns. NA not tolerated. |
Btot Total Beta diversity dist object
B_3 Beta diversity due to replacement dist object
Brich Beta diversity due to richness diferences dist object
quality the ouptput will print the quality of the dendogram representation. clustering performance is assessed by the correlation with the cophenetic distance
1 2 | ex1 <- beta_dist(W = dummy$abun)
ex1
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.