beta_part: Taxonimic betadiversity

In ibartomeus/fundiv: tools to calculate several functional trait diversity indexes

Description

Calculate taxonomic trait beta diversity for two communities using Carvalho et al. 2012 decomposition.

Usage

beta_part(c1, c2)

Arguments

c1	vector containing the species names in the first community. NA not tolerated.
c2	vector containing the species names in the first community. NA not tolerated.

Value

Btot Total Beta diversity

B_3 Beta diversity due to replacement

Brich Beta diversity due to richness diferences

quality the ouptput will print the quality of the dendogram representation. clustering performance is assessed by the correlation with the cophenetic distance

Examples

ex1 <- beta_part(c1 = c("sp3", "sp2", "sp1", "sp4", "sp5"), c2 = c("sp6", "sp7", "sp8", "sp4", "sp5"))
ex1

ibartomeus/fundiv documentation built on May 18, 2019, 1:29 a.m.